Hap 2 - atp

48 important questions on Hap 2 - atp

Electron transport chain in inner mitochondrial membrane

Produce free radicals

Complete oxidation of acetyl CoA

- 2x decarboxylation reactions
- refromation of oxaloacetate
- 4 oxidation reactions
- 1 substrate level phosphorylation

Oxidation of acetyl CoA - How much oxygen involved in CO2 formation

No oxygen involved --> But ATP involved, NADH release
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Oxidation of acetyl CoA - Where is H2O formed?

It is not formed in TCA, but used --> formed in oxidative phosphorylation (electron transport chain)

Oxidation of Acetyl CoA - Metabolic percursors of H2O?

O2 is the metabolic percursor

Oxidation of Acetyl CoA - role of Oxygen?

Oxygen is final acceptor of hydrogens --> CO2 release --> directly linked to oxidation of acetyl coa

Oxidation of Acetyl CoA - Directly linked to glucose oxidation and RQ concept?

It is directly linked to glucose oxidation --> use 6 O2 and produce 6 CO2 --> directly linked because it is in its own pathway
Not directly linked to RQ, since O2 is used in oxidative phosphorylation and CO2 is produced in TCA cycle

Glycolysis - fed state

- Fed state --> Glu-6-P formed by phosphorylation of glucose
- Phosphorylation by hexokinase (all cells) or glucokinase (liver, pancreas, hypothalamus, small intestine)
- nett accumulation of glucose inside cell --> metabolic trapping

Full oxidation of acetyl CoA

10 ATP

Full oxidation of pyruvic acid/pyruvate

12.5 ATP (because of NADHm)

Full oxidation of PEP

13.5 ATP (because of 1 ATP)

Full oxidation of GA3P

16 ATP (because of 1 ATP and 1 NADHc)

ATP yield in TCA from citrate to oxaloacetate

10 ATP

ATP yield in TCA from succinyl CoA to oxaloacetate

5 ATP

ATP yield in TCA from fumarate/malate to oxaloacetate

2.5 ATP

Conversion pyruvate to glucose

- gluconeogenesis
- cannot use pyruvate directly
- Via phosphoneolpyruvate (via malate)

Propionic acid/propionate complete oxidation

- Votile Fatty acid (VFA)
- Fermentation in large intestine

- Propionic acid - succinyl coa = - 3
- succinyl coa - malate = + 2.5
- malate - OAA (c) = + 1.5
- OAA - PEP = -1
- PEP = 13.5
Total ATP = 13.5

Blood levels - glucose

Changes in blood levels only reflect difference between input and output
Blood level is poor indicator of total flux (throughput)
Certain level of substrate cycling is required to minimize changes at different demands

What is ATP yield of (blood) glucose in leg muscle after

- Direct oxidation --> 30 ATP
- Indirect oxidation (via leg muscle glycogen) --> 29 ATP
- Indirect oxidation (via arm muscle glycogen) --> 0 ATP (since it cannot go back to blood)
- Indirect oxidation (via liver glycogen) --> 28 ATP
- Indirect oxidation (after 5 glucose/glycogen cycles in leg muscle) --> 30 - (5x1) = 25 ATP

Energetic efficiency - glucose oxidation

- Aerobic --> (30/33)/2816 = 35%
- Anaerobic --> 2*1374 = 2728 --> 2816-2728 = 88 kJ lost and 2 ATP trapped (2*33) is 66 kJ --> SO energetic efficiency = 66/88 = 75% and heat loss (88-66) is 22 kJ

Pentose phosphate pathway

- In cytoplasm!
- Alternative pathway for conversion of glu-6-P to fru-6-P
- Use for:
   50% of NADPH needed for FA synthesis
   Only source of NADPH in red blood cells
   Synthesis of 5 carbon sugars
- 3 mol of glucose --> 2 mol fru-6-P + 1 mol glyceraldehyde-3-P + 3 mol carbondioxide + 6 NADPH

--> IN comparison with glycolysis of 3 mol Glu-6-P --> 2 F-6-P + 1 GA3P + 15 ATP

Energetic of reverse reactions

- Neutral --> energy invested in forward is released in backward reaction
- Substrate cycle --> energy invested in forward is NOT released in backward reaction

Glucose substrate cycling

- 6 ATP loss (due to + 5 ATP in glycolysis and -11 ATP in gluconeogenesis)

Lactate pathway - cori cycle

- Glucose converted to lactic acid (anaerobic respiration) --> NO oxygen
- Lactate is formed when H+ from NADH temporarily combine with pyruvate --> release NAD (which accept H+ in glycolysis)
- In MUSCLE --> glu --> 2 ATP + 2 lactate
- In LIVER --> 2 lactate + from Beta oxidation 6 ATP + 2 ATP --> glucose

Lactic acid pathway

- Red blood cells only use lactic acid pathway --> no mitochondria
- In skeletal muscle and heart when ratio oxygen supple/need falls below critical level

Glucose substrate cycling - ATP costs

- Glucose --> 0
- Glucose - 6-P --> -1
- Fru-1,6-diP --> -2
- PEP --> -2
- Pyruvate --> -6
Total costs --> -11 ATP

Amino acids in TCA cycle

- Glucogenic AA --> can be converted in glucose --> degraded to intermediates of glycolysis or TCA
- Ketogenic AA --> CANNOT be converted in glucose --> degraded to acetyl coa
(tyrosine (phenylalanine), tryptophan, leucine, isoleucine, lysine)

Gluconeogenesis - Gram glucose formed out of 100 gram protein

50 gram

Gluconeogenesis - AA --> glucose

mW AA = 137 gram/mol
100 gram protein = 100/137 = 0.73 mol

AA --> PEP --> max. 1 PEP per AA
0.73 mol PEP --> 0.73/2 = 0.36 glucose
0.36 mol glucose = 0.36x180 = 66 gram glucose

Conditional essential AA

Under some conditions essential
- like Glycine --> to get rid of nitrogen
- asparagine, glutamine, arginine, glycine, proline, serine

Oxidative de-amination AA

- conversion of glutamate into ketoglutarate
- this release 2.5 ATP (by release of NADH)
- And release of nitrogen as amonium (NH4)

Excretion of nitrogenous waste

If water balance or weight is not a problem --> urea is common product (readily soluble) ureotelic animals
If water balance is a problem --> uric acid is common product (has a low solubility and crystallizes readily)

--> instead of urea to get rid of nitrogen

Uric acid in human

25% of waste comes from glycine
Blood plasma reference range
- 3.6-8.3 mg/dl in men
- 2.3-6.6 mg/dl for women
Excess accumulation of uric acid in blood --> gout or disease of kings or rich mans disease

Mol ATP per mJ metabolizable energy (ME)

CH --> 12.8
FA --> 13.0
Pro --> 11.0

Gluconeogenesis - How many gram glucose can be formed from 100 gram glycogen

Glucose mW = 180
Glycogen mW = n*162
--> approximately 110 gram

Gluconeogenesis - How many gram glucose can be formed from 100 gram tri-palmitate

mW tri-palmitate = 806
--> cannot be converted (fatty acid) into glucose --> but the glycerol backbone can be --> approximately 10-11 gram glucose

Gluconeogenesis - How many gram glucose can be formed from 100 gram casein

--> use AA to convert into glucose
--> 0.699 PEP /2 = 0.349 mol glucose
--> 0.349 x 180 = 63 gram glucose

Gross energy of protein

23.6 kj/g

Urea loss (protein)

5.2 kj/g

Cis fatty acids

- hydrogens on the same side of double bond
- Most naturally occuring unsaturated fatty acids in food

Trans fatty acids

- hydrogens on opposite sides of double bond
- molecules are more linear
- occures in partially hydrogenated foods when hydrogen atoms shift some double bonds and change the configuration from cis to trans

Fatty acid characteristics

- C1, C2 and C3 not included in triglycerides
- Fatty acids with double bonds are more liquid than solid FA

Energy stores - FA

- Fat is mostly stored as triglycerides
- is stored without water
- 10 kg body fat corresponds with 60 kg stored glycogen or 80 kg stored protein

FA metabolism - Fed state

- Triacylglycerol in chylomicrons and VLDL
- Lipoprotein lipase
- FA use for beta FA oxidation

FA metabolism - Fasting state

- Free Fatty Acids bound to albumin
- Adipose tissue, adipose triglyceride lipase, hormone sensitive lipase (HSL)
- FA use in liver for ketone body synthesis

Beta-oxidation of fatty acids

- Removal of 2 carbons from chain till you at the end of the chain, with oxidation at the beta-carbon of the fatty acid
- Per spiral 4 ATP is released (due to FADH, NADH)

Example ATP yield per mol - stearic acid (C18:0)

- Activation --> -2 ATP
- 8x beta-oxidation --> +32 ATP
- 9 Acetyl CoA --> 10x9 = +90 ATP
Total ATP = +120

- much more ATP stored in carbons of FA than glucose

ATP yield - unsaturated fatty acids

- 1.5 ATP less per double bond
--> Dont need the step saturated to unsatered --> so less energy generated
--> since there is no dehydrogenation of chain is required --> 1 FADH  (1.5 ATP) is not obtained)

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